Clinical Labs & Metadata

At clinical visits at which subjects contributed blood samples, we also collected samples for a battery of clinical laboratory tests including Blood Chemistry, Blood Counts, Inflammatory Markers, and Lipid Profiles. These clinical laboratory results are available to download below.

Descriptors of the columns in our clinical lab results table can be found in the downloadable "clinical_lab_descriptors" table, or by clicking the header below:

Subject and Sample Metadata

Our clinical labs dataset results contain some sample-level metadata to enable connection between these results and samples used in other modalities. The sample.sampleKitGuid identifier is used across many data modalities:

Sample Identifiers
cohort.cohortGuid: A Globally Unique Identifier (GUID) of the Cohort the subject enrolled in for our study subject.subjectGuid: A GUID for the Subject
sample.sampleKitGuid: A GUID for the Sample Kit, representing all material collected at a visit
sample.sampleGuid: A GUID for the sample collected for clinical lab testing

Subject Metadata (prefix: subject)
subject.biologicalSex: The biological sex of the Subject
subject.birthYear: The Birth Year of the Subject
subject.ageAtFirstDraw: The Age of the Subject at their first on-study sample collection
subject.race: The self-reported Race of the Subject
subject.races: The self-reported Race of the Subject
subject.ethnicity: The self-reported Ethnicity of the subject

Sample Metadata (prefix: sample)
sample.visitName: The name of the study visit (i.e. time point)
sample.visitDetails: Additional visit purpose/details, where available
sample.drawDate: The date of the study visit (Month and Year; e.g. 2021-03)
sample.subjectAgeAtDraw: The age of the Subject in years at the time of sample collection
sample.daysSinceFirstVisit: Timing of the sample collection relative to the first visit date (usually Flu Year 1 Day 0)
sample.diseaseStatesRecordedAtVisit: Disease state recored at the date of sample collection.

Clinical Lab Results

Data in the following columns of our table are results from clinical laboratory tests. Below, we show the column name, full name, units used, and normal ranges (where available). Normal ranges are provided as a guide, but may vary between clinical laboratories.

Anthropometric measures (prefix: am)

Colum NameFull NameUnits
am.bmiBody Mass Index (BMI)
am.heightHeightcm
am.weightWeightkg

Blood chemistry (prefix: chem)

Colum NameFull NameUnitsNormal Range
chem.altAlanine Transaminase (ALT)Units per L7 - 52
chem.albuminAlbuming per dL3.5 - 5.7
chem.alkaline_phosphataseAlkaline PhosphataseUnits per L39 - 117
chem.astAspartate Aminotransferase (AST)Units per L12 - 39
chem.t_biliBilirubin, Total (T-Bili)mg per dL0.1 - 1.3
chem.bunBlood Urea Nitrogen (BUN)mg per dL7 - 25
chem.calciumCalciummg per dL8.6 - 10.3
chem.co2Carbon Dioxide (CO2)mmol per L21 - 31
chem.clChloride (Cl)mmol per L98 - 108
chem.creatinineCreatininemg per dL0.7 - 1.3
chem.egfr_aaEstimated Glomerular Filtration Rate (eGFR) - African Americanml per min per 1.73 m2< 60
chem.egfr_non_aaEstimated Glomerular Filtration Rate (eGFR) - Non-African Americanml per min per 1.73 m2< 60
chem.globinGlobing per dL2 - 3.5
chem.glucoseGlucosemg per dL70 - 199
chem.ldhLactate DehydrogenaseUnits0 - 210
chem.magnesiumMagnesiummg per dL1.8 - 2.4
chem.phosphatePhosphatemg per dL2.5 - 4.5
chem.potassiumPotassiummmol per L3.5 - 5.1
chem.proteinProtein, Totalg per dL6.4 - 8.9
chem.sodiumSodiummmol per L133 - 145

Blood Counts (prefix: bc)

Colum NameFull NameUnitsNormal Range
bc.perc_basophils% Basophilspercent
bc.perc_eosinophils% Eosinophilspercent
bc.perc_lymphocytes% Lymphocytespercent
bc.perc_monocytes% Monocytespercent
bc.perc_neutrophils% Neutrophilspercent
bc.basophil_countAbsolute Basophil Countcount per uL0 - 202
bc.eosinophil_countAbsolute Eosinophil Count (AEC)count per uL0 - 400
bc.lymphocyte_countAbsolute Lymphocyte Count (ALC)count per uL1000 - 4800
bc.monocyte_countAbsolute Monocyte Count (AMC)count per uL200 - 900
bc.neutrophil_countAbsolute Neutrophil Count (ANC)count per uL1800 - 6600
bc.hematocritHematocritpercent39.2 - 50.2
bc.hemoglobinHemoglobing per dL12.1 - 18.1
bc.mchMean Corpuscular Hemoglobin (MCH)pg27.5 - 35.1
bc.mchcMean Corpuscular Hemoglobin Concentration (MCHC)g per dL32 - 36
bc.mcvMean Corpuscular Volume (MCV)fL80 - 100
bc.mpvMean Platelet Volume (MPV)fL7.2 - 11.7
bc.platelet_countPlatelet Countthousand count per uL150 - 400
bc.red_blood_cell_countRed Blood Cell Countmillion count per uL4.18 - 6.09
bc.rdwRed Cell Distribution Width (RDW)percent11.7 - 14.2
bc.wbcWhite Blood Cell Count (WBC)thousand count per uL4 - 11.1

HCMV Serology (prefix: cmv)

Colum NameFull Name
cmv.igg_serologyCMV IgG Serology Result (ELISA)
cmv.igg_serology_interpretationCMV IgG Serology Result Interpretation

Inflammatory Markers (prefix: infl)

Colum NameFull Name
infl.anti_ccp3Anti-CCP3
infl.anti_ccp31Anti-CCP31
infl.hs_crpC-Reactive Protein, High-Sensitivity (HS-CRP)
infl.rf_iga_interpretationRFIgA Interpretation
infl.rf_iga_resultRFIgA Result
infl.rf_igm_interpretationRFIgM Interpretation
infl.rf_igm_resultRFIgM Result
infl.esrSED Rate-Westergren (ESR)

Lipid Profile (prefix: lip)

Column NameFull NameUnitsNormal Range
lip.cholesterol_hdlCholesterol, HDLmg per dL40 - 59
lip.cholesterol_ldlCholesterol, LDLmg per dL57 - 129
lip.cholesterol_non_hdlCholesterol, Non-HDLmg per dL0 - 189
lip.cholesterol_totalCholesterol, Totalmg per dL136 - 239
lip.chlesterol_hdl_ratioCholesterol/HDL Ratioratio
lip.triglyceridesTriglyceridesmg per dL48 - 149
Sound Life Clinical Lab Results and Metadata
File Name Description Download Link
aifi_sound-life_clinical_lab_results.csv
aifi_sound_life_clinical_lab_descriptors.csv