To establish a reference dataset, we carefully curated, clustered, and labeled our PBMC dataset. The result is a 3-level hierarchical labeling scheme that identified 9 broad classes, 29 intermediate cell types, and 71 high resolution cell types.
For additional details, see the subsections that describe labeling, show key markers, and provide UMAP projections:
Cell type group | N Cells | % of cells |
|
|---|---|---|---|
160,632 | 8.82% | ||
743,615 | 40.82% | ||
406,730 | 22.33% | ||
148,605 | 8.16% | ||
327,919 | 18.00% | ||
232,87 | 1.28% | ||
10,937 | 0.60% |
Data from each of these cell type groups with the same UMAP projections can be found on the Downloads page.